Philippine Payroll PRO: Your on-premise payroll solution since 1999, now updated with the latest SSS, withholding tax, and PhilHealth tables, fully compliant with the TRAIN Law.

The Philippine Payroll PRO is a reliable payroll system designed to handle the needs of your business since 1999. Trusted by over 3,000+ SME customers, it has proven its dependability with continuous maintenance and dedicated support to ensure smooth operations. While many solutions have shifted to the cloud, Payroll PRO remains the only dependable on-premise option in the market, making it ideal for businesses not yet ready to transition to cloud-based systems. It is easy to use and simplifies payroll management while ensuring compliance with government regulations.

With Payroll PRO, you can:

Compute in a flash! Regular Pay, Overtime pay, Undertime pay, Adjustments, Taxes, SSS, Pag-Ibig, and PhilHealth.
Generate multiple reports: Payslips, SSS reports, PhilHealth reports, Pag-ibig monthly reports, W2, Alpha list
Submit ATM bank payroll reports in a file
Process monthly or daily rate employee salaries in different payroll periods – weekly, semi-monthly, or monthly.
Generate historical reports of payroll, and contributions and track loans and advances per employee.
Access the built-in updated Tax, SSS, PhilHealth, and Pag-ibig Tables.

Employee Information Management Features:

Detailed employee information such as educational background, family and relatives information, parents and spouse records.
Track the full productivity of workforce, including the varied experiences, talents, and skills of all staff within the enterprise.
Track licensures and examinations taken, employment history, skills and proficiencies of employees.
Disciplinary actions, merits, awards received, legal and medical records and many more!
All employee information reports can be exported to Excel.

All Mustard Seed Business Solution products were developed to provide small-medium enterprises with financial and business management solutions that take care of all critical business needs with the minimal learning curve.

Need more information?

Get in touch with one of our product experts today.

Frequently Asked Questions

1. What is Payroll PRO and who is it best suited for?

Payroll PRO is Mustard Seed’s traditional on-premise payroll system, launched in 1999 and trusted by over 3,000 SMEs in the Philippines. It’s ideal for organizations that prefer an in-house, non-cloud payroll solution.

2. What compliance updates are included with Payroll PRO?

The system is regularly updated with the latest SSS, withholding tax, PhilHealth tables, and is fully compliant with the TRAIN Law.

3. What types of payroll calculations can Payroll PRO handle?

Payroll PRO efficiently computes regular pay, overtime, undertime, adjustments, taxes, and contributions to SSS, Pag-IBIG, and PhilHealth.

4. Which payroll periods does Payroll PRO support?

The software supports weekly, semi-monthly, and monthly payroll cycles, and is also capable of handling daily-rate employee calculations.

5. Can Payroll PRO generate payroll reports and payslips?

Yes—it can generate payslips, SSS/PhilHealth/Pag-IBIG reports, W2, Alpha List, and ATM bank payroll files.

6. How does Payroll PRO differ from cloud-based payroll solutions?

Payroll PRO is one of the few reliable on-premise options left, offering full functionality without requiring a cloud transition—making it ideal for businesses not yet ready or able to move to cloud systems.

7. How does Payroll PRO help manage employee information?

The system allows you to record and export via Excel: educational background, family/relatives, parent/spouse details, employment history, licenses, skills, as well as disciplinary actions, awards, legal and medical records.